Seung-Jong Park's Publications

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    • [ By type ]

    (Reverse chronological order)

    2023

    • "Libra: Harvesting Idle Resources Safely and Timely in Serverless Clusters", Hanfei Yu, Christian Fontenot, Hao Wang, Jian Li, Xu Yuan, Seung-Jong Park, to be appeared in the proceeding of The 32nd ACM International Symposium on High-Performance Parallel and Distributed Computing (ACM HPDC), Orlando, Florida, United States, June 2023.

    2022

    • "Accelerating Serverless Computing by Harvesting Idle Resources", Hanfei Yu, Hao Wang, Jian Li, Xu Yuan, Seung-Jong Park, in the proceeding of the ACM WEB (formerly known as International World Wide Web Conference) 2022, Lyon, France, April 2022.

    2021

    • "Harvesting Idle Resources in Serverless Computing via Reinforcement Learning", Hanfei Yu, Hao Wang, Jian Li, Seung-Jong Park, arXiv preprint arXiv:2108.12717, 2021.

    2020

    • "Distributed de novo assembler for large-scale long-read datasets," Sayan Goswami, Kisung Lee, and Seung-Jong Park, the IEEE International Conference on Big Data, 2020.

    • "Shallow Subsurface Environmental Remediation by Using Tracer-Surfactant-Foam Processes: History-Matching and Performance Prediction," H. Fleifel, M. Izadi, Seung-Jong Park, I. Gupta, G.S. Lee, and S.I. Kam, the Journal of Transport in Porous Media, p. 223-250, Vol. 131, Issue 1, 2020.

    • "An OpenMP-based Parallel Execution of Neural Networks Specified in NNEF," Nakhoon Baek, Seung-Jong Park, 20th International Conference on Algorithms and Architectures for Parallel Processing (ICA3PP), 2020.

    2019

    • "Social and geographical disparities in Twitter use during Hurricane Harvey," Lei Zou, Nina S. N. Lam, Shayan Shams, Heng Cai, Michelle A. Meyer, Seungwon Yang, Kisung Lee, Seung-Jong Park & Margaret A. Reams, International Journal of Digital Earth, 12:11, 1300-1318, DOI: 10.1080/17538947.2018.1545878.

    • "A hybrid and scalable error correction algorithm for indel and substitution errors of long reads," Arghya Das, Sayan Goswami, Kisung Lee, Seung-Jong Park, BMC Genomics 20, 948, 2019, https://doi.org/10.1186/s12864-019-6286-9.

    2018

    • "ParLECH: Parallel Long-read Error Correction with Hadoop," Arghya Kusum Das, Kisung Lee and Seung-Jong Park, The IEEE International Conference on Bioinformatics and Biomedicine (BIBM), regular paper acceptance rate: 19.2%, Madrid, Spain, Dec, 2018.

    • "Deep Generative Breast Cancer Screening and Diagnosis," Shayan Shams, Richard Platania, Jian Zhang, Joohyun Kim, Seung-Jong Park, in the proceeding of the 21st International Conference on Medical Image Computing & Computer Assisted Intervention (MICCAI), Granada, Spain, 2018.

    • "Towards Distributed Cyberinfrastructure for Smart Cities using Big Data and Deep Learning Technologies," Shayan Shams, Sayan Goswami, Kisung Lee, Seungwon Yang, Seung-Jong Park, in the proceeding of the 38th IEEE International Conference on Distributed Computing Systems, ICDCS2018, July 2 - 5, 2018, Vienna, Austria

    • "GPU-Accelerated Large-Scale Genome Assembly," Sayan Goswami, Kisung Lee, Shayan Shams and Seung-Jong Park, in the proceeding of the IEEE International Parallel & Distributed Processing Symposium (IEEE IPDPS), 2018, Vancouver, British Columbia CANADA.

    • "A Distributed Semi-Supervised Platform for DNase-Seq Data Analytics using Deep Generative Convolutional Networks," Shayan Shams, Richard Platania, Joohyun Kim, Jian Zhang, Kisung Lee, Seungwon Yang, Seung-Jong Park, 9th ACM Conference on Bioinformatics, Computational Biology, and Health Informatics (ACM BCB), Washington DC, Aug, 2018.

    2017

    • "Automated Breast Cancer Diagnosis Using Deep Learning and Region of Interest Detection (BC-DROID)," Richard Platania, Shayan Shams, Seungwon Yang, Jian Zhang, Kisung Lee, Seung-Jong Park, in the proceeding of the 8th ACM Conference on Bioinformatics, Computational Biology, and Health Informatics (ACM BCB), 2017, Boston MA, USA.

    • "Augmenting Amdahl's Second Law: A Theoretical Model to Build Cost-Effective Balanced HPC Infrastructure for Data-Driven Science," Arghya Kusum Das, Jaeki Hong, Sayan Goswami, Richard Platania, Kisung Lee, Wooseok Chang, Seung-Jong Park, Ling Liu, in the proceeding of the IEEE International Conference on Cloud Computing (CLOUD) 2017, Honolulu, USA.

    • "Evaluation of Deep Learning Frameworks over Different HPC Architectures," Shayan Shams, Richard Platania, Kisung Lee and Seung-Jong Park, in the proceeding of the 37th IEEE International Conference on Distributed Computing Systems (ICDCS 2007), Atlanta, USA, 2017.

    • "Coflourish: An SDN-Assisted Coflow Scheduling Framework for Clouds," Chui-Hui Chiu, Dipak Kumar Singh, Qingyang Wang, Seung-Jong Park, in the proceeding of the IEEE International Conference on Cloud Computing (CLOUD) 2017, Honolulu, USA.

    • "Minimal Coflow Routing and Scheduling in OpenFlow-based Cloud Storage Area Networks," Chui-Hui Chiu, Dipak Kumar Singh, Qingyang Wang, Kisung Lee, Seung-Jong Park, in the proceeding of the IEEE International Conference on Cloud Computing (CLOUD) 2017, Honolulu, USA.

    2016

    • "Lazer: Distributed Memory-Efficient Assembly of Large-Scale Genomes," Sayan Goswami, Arghya Kusum Das, Richard Platania, Kisung Lee, and Seung-Jong Park, in the proceeding of the IEEE International Conference on Big Data (IEEE BigData), 2016.

    • "Hadoop-based replica exchange over heterogeneous distributed cyberinfrastructures," Richard Platania, Shayan Shams, Chui-Hui Chiu, Nayong Kim, Joohyun Kim, Seung-Jong Park, in the journal of Concurrency and computation: Practice and Experience, Wiley 2016, doi: 10.1002/cpe.3878.

    • "Giraph-based Genome Assembler for Gigabase Scale Genomes," Praveen Kumar Kondikoppa, Arghya Kusum Das, Sayan Goswami, Richard Platania, Seung-Jong Park, in the proceeding of the 8th International Conference on Bioinformatics and Computational Biology (BICoB), pp.55-62, Las Vegas, USA, 2016.

    • "Towards Fair and Low Latency Next Generation High Speed Networks: AFCD Queuing," Lin Xue, Suman kumar, Chui-Hui Chiu, Seung-Jong Park, in the journal of Network and Computer Applications, Elsevier, Vol 70, Issue C, pp. 183-193, 2016, doi: 10.1016/j.jnca.2016.03.021.

    • "BIC-LSU: Big Data Research Integration with Cyberinfrastructure for LSU," Chui-hui Chiu, Nathan Lewis, Dipak Kumar Singh, Arghya Kusum Das, Mohammad M Jalazai, Richard Platania, Sayan Goswami, Kisung Lee, Seung-Jong Park, in the proceeding of the 2016 XSEDE Conference (XSEDE16), Miami, FL, USA, 2016.

    2015

    • "Evaluating Different Distributed Cyber-Infrastructure for Data and Compute Intensive Scientific Applications", Arghya Kusum Das*, Seung-Jong Park, Jaeki Hong, Wooseok Chang, in the proceeding of the IEEE International Conference on Big Data (IEEE BigData 2015), 2015

    • "Enabling Large-scale Biomolecular Conformation Search with Replica Exchange Statistical Temperature Molecular Dynamics (RESTMD) over HPC and Cloud Computing Resources," Nayong Kim, Richard Platania*, Tom Keyes, Wei Huang, Chris Knight, Seung-Jong Park, Joohyun Kim, in the proceeding of the 8th International Workshop on Bio and Intelligent Computing (BiCOM-2015), Korea, 2015.

    • "FaLL: a Fair and Low Latency Queuing Scheme for Data Center Networks," Lin Xue*, Chui-Hui Chiu*, Suman Kumar*, Praveenkumar Kondikoppa*, Seung-Jong Park, in the Proceeding of the International Conference on Computing, Networking and Communications, (ICNC), 2015.

    2014

    • "Experimenting Big Data Applications for Genome Sequence Assembly over NSF-Cloud," Arghya Kusum Das*, Praveenkumar Kondikoppa*, Seung-Jong Park, in the Proceeding of the NSFCloud Workshop on Experimental Support for Cloud Computing, VA 2014.

    • "MapReduce based Parallel Suffix Tree Construction for Human Genome," Praveenkumar Kondikoppa*, Umesh Chandra*, Seung-Jong Park, Manish Patil and Rahul Shah, in the proceeding of the 20th IEEE International Conference on Parallel and Distributed Systems (ICPADS), pp.664-670, Taiwan, Dec 2014.

    • "MapReduce-based RESTMD: Enabling Large-scale Sampling Tasks with Distributed HPC Systems”, Praveenkumar Kondikoppa, Richard Platania, Seung-Jong Park, Shuju Bai, Tom Keyes and Jaegil Kim, Nayong Kim, and Joohyun Kim, in the proceeding of International Workshop for Science Gateways 2014.

    • "Impact of Loss Synchronization on Reliable High Speed Networks: A Model Based Simulation," Suman Kumar, Lin Xue, and Seung-Jong Park, Journal of Computer Networks and Communications, vol. 2014, Article ID 795489, 12 pages, 2014, doi:10.1155/2014/795489.

    • "DMCTCP: Desynchronized Multi-Channel TCP for High Speed Access Networks with Tiny Buffers," Cheng Cui, Lin Xue, Chui-Hui Chiu, Praveenkumar Kondikoppa, Seung-Jong Park, in proceedings of the International Conference on Computer Communications and Networks(ICCCN 2014), Shanghai, China, 2014.

    2013

    • "AFCD: An Approximated-Fair and Controlled-Delay Queuing for High Speed Networks," Lin Xue, Suman Kumar, Cheng Cui, Praveenkumar Kondikoppa, Chui-Hui Chiu, Seung-Jong Park, in proceedings of the International Conference on Computer Communications and Networks(ICCCN 2013), Nassau, Bahamas, 2013.

    • "An MPI-enabled MapReduce framework for molecular dynamics simulation applications" Bai, S.; Khosravi, E.; Seung-Jong Park, 2013 IEEE International Conference on Bioinformatics and Biomedicine (BIBM), pp.1-3, 18-21 Dec. 2013

    • "A Hadoop approach to advanced sampling algorithms in molecular dynamics simulation on cloud computing" Niu, Jin; Bai, S.; Khosravi, E.; Seung-Jong Park, 2013 IEEE International Conference on Bioinformatics and Biomedicine (BIBM), pp.452-455, 18-21 Dec. 2013

    • "Performance of REMD on cloud computing platform," Jin Niu, Shuju Bai, Ebrahim Khosravi, and Seung-Jong Park, 2013 MCBIOS conference, April 5-6, Columbia, Missouri, 2013.

    • "Approximate string matching by position restricted alignment," Manish Patil, Xuanting Cai, Sharma V. Thankachan, Rahul Shah, Seung-Jong Park, David Foltz, EDBT/ICDT Workshops, 384-391, 2013.

    2012

    • "Network-Aware Scheduling of MapReduce Framework on Distributed Clusters over High Speed Networks," Praveenkumar Kondikoppa, Seung-Jong Park, Chui-Hui Chiu, Cheng Cui and Lin Xue, Workshop on Cloud Services, Federation, and the 8th Open Cirrus Summit, San Jose, USA. 2012.

    • "An Evaluation of Fairness Among Heterogeneous TCP Variants Over 10Gbps High-speed Networks", Lin Xue, Suman Kumar, Cheng Cui, Seung-Jong Park, in proceedings of the 37th Annual IEEE Conference on Local Computer Networks (LCN 2012), Clearwater, FL, 2012.

    • "Experimental Evaluation of the Effect of Queue Management Schemes on the Performance of High Speed TCPs in 10Gbps Network Environment," Lin Xue, Cheng Cui, Suman Kumar, Seung-Jong Park, in the proceeding of the International Conference on Computing, Networking and Communications (ICNC 2012), Hawaii, USA, 2012.

    2011

    • "Investigating combinatorial approaches in virtual screening on human inducible 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase (PFKFB3): A case study for small molecule kinases," Robert B. Crochet, Michael C. Cavalier, Minsuh Seo, Jeong Do Kim, Young-Sun Yim, Seung-Jong Park, and Yong-Hwan Lee, in the Journal of Analytical Biochemistry, Elsevier, Volume 418, Issue 1, 2011, pp.143-148.

    2010

    • "A fluid-based simulation study: the effect of loss synchronization on sizing buffers over 10Gbps high speed networks," Suman Kumar, Mohammed Azad, and Seung-Jong Park, at the proceeding of the 8th International Workshop on Protocols for Future, Large-scale & Diverse Network Transports (PFLDNeT), Lancaster, PA, 2010.

    • "A Loss-Event Driven Scalable Fluid Simulation Method for High Speed Networks ," Suman Kumar, Seung-Jong Park, and S. Sitharama Iyengar, in the Journal of Computer Networks, Elsevier, Volume 54, Issue 1, 2010, pp.112-132.

    • "Congestion-Aware Topology Controls for Wireless Multi-hop Networks," Seung-Jong Park and R. Sivakumar, in the Journal of Ad-hoc Networks, Elsevier, Volume 8, Issue 3, 2010, pp. 295-312.

    • "Measurement and Performance Issues of Transport Protocols over 10Gbps High Speed Optical Networks," Yixin Wu, Suman Kumar, and Seung-Jong Park, in the Journal of Computer Networks, Elsevier, Volume 54, Issue 3, 2010, pp.475-488.

    2009

    • "Probability Model for Data Redundancy Detection in Sensor Networks," Suman Kumar and S.-J. Park, in the Special Issue of the Journal of Mobile Information Systems, Volume 5, Number 2, 2009, pp.195-204.

    • "On Transport Protocol Performance Measurement over 10Gbps High Speed Optical Network," Yixin Wu, Suman Kumar and S.-J. Park, accepted at The 18th International Conference on Computer Communications and Networks (ICCCN 2009), 2009.

    2008

    • "A Scalable Correlation Aware Aggregation Strategy for Wireless Sensor Networks," Y. Zhu, R. Vedantham, S.-J. Park and R. Sivakumar, in Elsevier Information Fusion Journal, Vol9, Issue 3, July, pp.354-369, 2008.

    • "GARUDA: Achieving Effective Reliability for Downstream Communication in Wireless Sensor Networks," S.-J. Park, R. Vedantham, R. Sivakumar and I. Akyildiz, in the journal of IEEE transactions on Mobile Computing, Vol.7, No.2, pp.214-230, Feb, 2008.

    • "Energy Efficient Correlated Data Aggregation for Wireless Sensor Networks," S.-J. Park and R. Sivakumar, in the special issue of International Journal of Distributed Sensor Networks, Vol.4, Issue 1, pp.7-13, 2008.

    2007

    • "Sink-to-Sensors Congestion Control," R. Vedantham, S.-J. Park and R. Sivakumar in the journal of Elsevier Ad Hoc Networks Journal, vol 5, no. 4, pp462-485, May 2007.

    • "Time-Adaptive Numerical Simulation for High Speed Networks," S. Kumar, S.-J. Park, S. Iyengar, and J.-H. Kimn, in the Proc. of High Performance Computing, Networking and Communication System (HPCNCS-07), Orlando, FL, 2007.

    • "EnLIGHTened Computing: An Architecture for Co-allocating Network, Compute, and other Grid Resources for High-End Applications," L. Battestilli, A. Hutanu, G. Karmous-Edwards, D. Katz, J. MacLaren, J. Mambretti, H. Moore, S-J Park, H. Perros, S. Sundar, S. Tanwir, S. Thorpe, and Y. Xin, in the proceeding of IEEE Honet'07, Dubai, UAE, November 2007.

    2006

    • "ACKNET, A Synthetic, Reliable, and Accurate Network Emulator over Long Fat Networks," Y. Zhou, Y. Yuan and S.-J. Park, in the Proc. of the 17th Annual Argonne Symposium for Undergraduates in Science, Engineering and Mathematics, Nov, 2006.

    2005

    • "A Scalable Correlation Aware Aggregation Strategy for Wireless Sensor Networks ," Y. Zhu, R. Vedantham, S.-J. Park and R. Sivakumar, in the Proceeding of IEEE International Conference on Wireless Internet (WICON), Budapest, Hungary, July 2005.

    • "Sink-to-Sensors Congestion Control," Ramanuja Vedantham, Seung-Jong Park, and Raghupathy Sivakumar, in the Proceedings of IEEE Conference on Communications, Seoul, Korea, 2005

    2004

    • "A Scalable Approach for Reliable Downstream Data Delivery in Wireless Sensor Networks," Seung-Jong Park, Ramanuja Vedantham, Raghupathy Sivakumar and Ian F. Akyildiz, the Proceedings of ACM International Symposium on Mobile Ad hoc Networking and Computing (MOBIHOC), pp78-89, Japan, May 2004.

    • "Transport Layer Protocols in Ad Hoc Networks," K. Sundaresan, Seung-Jong Park, and R. Sivakumar, the book of Ad Hoc Networks: Technologies and Protocols published by Kluwer Academic Publishers, Springer, pp.123-152, 2004.

    • "TCP Performance over Mobile Ad-hoc Networks: A Quantitative Study," V. Anantharaman, Seung-Jong Park, K. Sundaresan, and R. Sivakumar, Journal of Wireless Communications and Mobile Computing (WCMC), vol 4, Issue 2, pp203-222, Mar 2004.

    2003

    2002

    1999

    1998

    • "Scaling power up to resist SIR measurement error in CDMA mobile systems," Dongwoo Kim, Seung Jong Park, and J. Lee, In proceedings of CDMA International Conference (CIC), pp. 419-422, Seoul, Korea, 1998.

    1997

    • "Optimal Channel Separation in CDMA Mobile Systems," Seung Jong Park and Dongwoo Kim, In proceeding of CDMA International Conference, pp. 419-422, Korea, 1997.

    1996

    • "Frequency Coordination between Adjacent Carriers of Two CDMA operators," Seung Jong Park, et al, In proceeding of 48th IEEE Vehicular Technology Conference, pp. 1458-1461, Atlanta, USA, 1996.

    1994

    • "Complexity Reduction Method for Vector Sum Excited Linear Prediction Coding," Sung Joo Kim, Seung Jong Park, Yung-Hwan Oh, In proceeding of International Conference on Spoken Language Processing, pp. 2071~2074, Japan, 1994.